Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AC254562.1-201ENST00000417586 456 ntBASIC19.21■□□□□ 0.67
LGR5O75473 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.21■□□□□ 0.67
LGR5O75473 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.21■□□□□ 0.67
LGR5O75473 AC004877.2-201ENST00000623941 599 ntBASIC19.21■□□□□ 0.67
LGR5O75473 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
LGR5O75473 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LGR5O75473 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LGR5O75473 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LGR5O75473 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LGR5O75473 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LGR5O75473 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
LGR5O75473 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
LGR5O75473 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LGR5O75473 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
LGR5O75473 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.2■□□□□ 0.66
LGR5O75473 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
LGR5O75473 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.2■□□□□ 0.66
LGR5O75473 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.2■□□□□ 0.66
LGR5O75473 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LGR5O75473 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGR5O75473 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.2■□□□□ 0.66
LGR5O75473 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 AC012313.1-201ENST00000593393 3059 ntBASIC19.19■□□□□ 0.66
LGR5O75473 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 HTR5BP-201ENST00000430851 1154 ntBASIC19.19■□□□□ 0.66
LGR5O75473 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.19■□□□□ 0.66
LGR5O75473 SLC25A6P2-201ENST00000497974 877 ntBASIC19.19■□□□□ 0.66
LGR5O75473 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.19■□□□□ 0.66
LGR5O75473 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.19■□□□□ 0.66
LGR5O75473 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.19■□□□□ 0.66
LGR5O75473 KRT19P2-202ENST00000557173 1012 ntBASIC19.19■□□□□ 0.66
LGR5O75473 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.19■□□□□ 0.66
LGR5O75473 PDPK2P-202ENST00000562415 1191 ntBASIC19.19■□□□□ 0.66
LGR5O75473 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.19■□□□□ 0.66
LGR5O75473 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.19■□□□□ 0.66
LGR5O75473 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGR5O75473 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LGR5O75473 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGR5O75473 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGR5O75473 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGR5O75473 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.18■□□□□ 0.66
LGR5O75473 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.18■□□□□ 0.66
LGR5O75473 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGR5O75473 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.18■□□□□ 0.66
LGR5O75473 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LGR5O75473 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LGR5O75473 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.18■□□□□ 0.66
LGR5O75473 MKNK2P1-201ENST00000437526 628 ntBASIC19.18■□□□□ 0.66
LGR5O75473 FAM185BP-201ENST00000443595 716 ntBASIC19.18■□□□□ 0.66
LGR5O75473 AC087163.2-201ENST00000457299 853 ntBASIC19.18■□□□□ 0.66
LGR5O75473 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.18■□□□□ 0.66
LGR5O75473 CXCL1P1-201ENST00000502804 216 ntBASIC19.18■□□□□ 0.66
LGR5O75473 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.18■□□□□ 0.66
LGR5O75473 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LGR5O75473 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LGR5O75473 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LGR5O75473 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LGR5O75473 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGR5O75473 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGR5O75473 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LGR5O75473 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LGR5O75473 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LGR5O75473 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.17■□□□□ 0.66
LGR5O75473 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LGR5O75473 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.17■□□□□ 0.66
LGR5O75473 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LGR5O75473 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.17■□□□□ 0.66
LGR5O75473 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LGR5O75473 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.17■□□□□ 0.66
LGR5O75473 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.17■□□□□ 0.66
LGR5O75473 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms