Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNOT3O75175 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.89■□□□□ 0.29
CNOT3O75175 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.89■□□□□ 0.29
CNOT3O75175 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.89■□□□□ 0.29
CNOT3O75175 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CNOT3O75175 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.89■□□□□ 0.29
CNOT3O75175 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CNOT3O75175 AP000347.1-202ENST00000435868 847 ntBASIC16.89■□□□□ 0.29
CNOT3O75175 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 AC132008.2-207ENST00000454517 770 ntBASIC16.89■□□□□ 0.29
CNOT3O75175 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CNOT3O75175 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 AC112698.1-201ENST00000510299 916 ntBASIC16.89■□□□□ 0.29
CNOT3O75175 AC106795.1-205ENST00000512851 1056 ntBASIC16.89■□□□□ 0.29
CNOT3O75175 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CNOT3O75175 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.89■□□□□ 0.29
CNOT3O75175 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CNOT3O75175 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNOT3O75175 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT3O75175 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CNOT3O75175 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
CNOT3O75175 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.88■□□□□ 0.29
CNOT3O75175 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.88■□□□□ 0.29
CNOT3O75175 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 PHGDH-209ENST00000641074 1780 ntBASIC16.88■□□□□ 0.29
CNOT3O75175 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.88■□□□□ 0.29
CNOT3O75175 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.88■□□□□ 0.29
CNOT3O75175 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.88■□□□□ 0.29
CNOT3O75175 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.88■□□□□ 0.29
CNOT3O75175 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CNOT3O75175 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.88■□□□□ 0.29
CNOT3O75175 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CNOT3O75175 AL118508.1-201ENST00000613502 2345 ntBASIC16.88■□□□□ 0.29
CNOT3O75175 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.88■□□□□ 0.29
CNOT3O75175 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CNOT3O75175 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.88■□□□□ 0.29
CNOT3O75175 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT3O75175 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT3O75175 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CNOT3O75175 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CNOT3O75175 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT3O75175 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CNOT3O75175 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT3O75175 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CNOT3O75175 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CNOT3O75175 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CNOT3O75175 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.87■□□□□ 0.29
CNOT3O75175 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.87■□□□□ 0.29
CNOT3O75175 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT3O75175 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CNOT3O75175 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.87■□□□□ 0.29
CNOT3O75175 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms