Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 ELK2BP-201ENST00000415014 1224 ntBASIC19.53■□□□□ 0.72
CHMP2AO43633 LINC00982-205ENST00000420957 435 ntBASIC19.53■□□□□ 0.72
CHMP2AO43633 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP2AO43633 AC098831.1-202ENST00000438821 336 ntBASIC19.53■□□□□ 0.72
CHMP2AO43633 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2AO43633 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP2AO43633 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2AO43633 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHMP2AO43633 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2AO43633 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2AO43633 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHMP2AO43633 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP2AO43633 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2AO43633 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP2AO43633 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2AO43633 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHMP2AO43633 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2AO43633 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CHMP2AO43633 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2AO43633 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2AO43633 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2AO43633 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2AO43633 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP2AO43633 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP2AO43633 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP2AO43633 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP2AO43633 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CHMP2AO43633 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP2AO43633 AC006557.2-201ENST00000592985 1240 ntBASIC19.52■□□□□ 0.72
CHMP2AO43633 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CHMP2AO43633 BX640515.1-201ENST00000617215 977 ntBASIC19.52■□□□□ 0.72
CHMP2AO43633 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP2AO43633 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2AO43633 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2AO43633 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2AO43633 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2AO43633 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP2AO43633 AC006504.4-201ENST00000592118 1568 ntBASIC19.52■□□□□ 0.71
CHMP2AO43633 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2AO43633 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2AO43633 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.52■□□□□ 0.71
CHMP2AO43633 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2AO43633 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2AO43633 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.52■□□□□ 0.71
CHMP2AO43633 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2AO43633 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2AO43633 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2AO43633 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.52■□□□□ 0.71
CHMP2AO43633 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2AO43633 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CHMP2AO43633 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CHMP2AO43633 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHMP2AO43633 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.51■□□□□ 0.71
CHMP2AO43633 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 LINC00896-202ENST00000609602 2128 ntBASIC19.51■□□□□ 0.71
CHMP2AO43633 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHMP2AO43633 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP2AO43633 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP2AO43633 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMP2AO43633 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMP2AO43633 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMP2AO43633 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP2AO43633 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMP2AO43633 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP2AO43633 AC004706.3-202ENST00000621574 984 ntBASIC19.51■□□□□ 0.71
CHMP2AO43633 AC117500.6-201ENST00000624871 588 ntBASIC19.51■□□□□ 0.71
CHMP2AO43633 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CHMP2AO43633 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP2AO43633 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP2AO43633 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP2AO43633 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHMP2AO43633 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMP2AO43633 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP2AO43633 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CHMP2AO43633 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP2AO43633 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2AO43633 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP2AO43633 AC106820.2-201ENST00000563775 3264 ntBASIC19.5■□□□□ 0.71
CHMP2AO43633 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CHMP2AO43633 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CHMP2AO43633 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms