Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC135586.1-201ENST00000539323 574 ntBASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 CHCHD2P3-201ENST00000603038 451 ntBASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 AP3S2-216ENST00000617003 1561 ntBASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM88BA6NKF7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 RN7SL837P-201ENST00000463010 287 ntBASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM88BA6NKF7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM88BA6NKF7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 ACTBP11-201ENST00000436287 1126 ntBASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 AL138918.1-201ENST00000568306 659 ntBASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 AL035456.1-201ENST00000456064 1369 ntBASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
TMEM88BA6NKF7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM88BA6NKF7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM88BA6NKF7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms