Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 BX276092.7-203ENST00000637198 1536 ntBASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 AC113347.1-201ENST00000413321 391 ntBASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 HOMER2P1-201ENST00000455653 964 ntBASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 AC005363.2-201ENST00000618631 242 ntBASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 AL023973.1-201ENST00000624619 620 ntBASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3EA5X5Y0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 AC012306.2-201ENST00000609350 630 ntBASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 PP12613-201ENST00000424958 2230 ntBASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3EA5X5Y0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 MIR662-201ENST00000384847 95 ntBASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 AC005104.2-201ENST00000427818 678 ntBASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 AL137013.1-201ENST00000432946 1228 ntBASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 AC112698.1-201ENST00000510299 916 ntBASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 AL441883.1-201ENST00000566170 1045 ntBASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 AC079602.3-201ENST00000623931 403 ntBASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3EA5X5Y0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms