Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 PCDHB17P-201ENST00000539533 2393 ntBASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 AP001412.1-201ENST00000608405 714 ntBASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 AC113410.3-201ENST00000623366 203 ntBASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 AC093525.9-201ENST00000624961 1746 ntBASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 AC063926.3-201ENST00000624734 5658 ntBASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV18A0A075B6X5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 AC078925.2-201ENST00000624013 1973 ntBASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 ID1-201ENST00000376105 1233 ntBASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 RPS2P55-201ENST00000397318 883 ntBASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 AC107956.1-201ENST00000494359 873 ntBASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 AC026471.5-201ENST00000615068 467 ntBASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV18A0A075B6X5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV18A0A075B6X5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms