Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 NSUN5P1-202ENST00000421140 1535 ntBASIC19.83■□□□□ 0.77
CLIC4Q9Y696 NSUN5P2-203ENST00000457352 1529 ntBASIC19.83■□□□□ 0.77
CLIC4Q9Y696 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 RCN1P2-201ENST00000398357 915 ntBASIC19.83■□□□□ 0.77
CLIC4Q9Y696 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 IGHV3-47-201ENST00000425060 335 ntBASIC19.83■□□□□ 0.77
CLIC4Q9Y696 KRT17P6-201ENST00000453795 1220 ntBASIC19.83■□□□□ 0.77
CLIC4Q9Y696 STK19B-204ENST00000512515 211 ntBASIC19.83■□□□□ 0.77
CLIC4Q9Y696 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.83■□□□□ 0.77
CLIC4Q9Y696 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLIC4Q9Y696 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 INTS4P1-201ENST00000438455 1935 ntBASIC19.82■□□□□ 0.76
CLIC4Q9Y696 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 LINC00265-3P-201ENST00000447588 903 ntBASIC19.82■□□□□ 0.76
CLIC4Q9Y696 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 RNF216P1-203ENST00000404404 2427 ntBASIC19.82■□□□□ 0.76
CLIC4Q9Y696 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLIC4Q9Y696 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 MINOS1P3-201ENST00000457048 203 ntBASIC19.81■□□□□ 0.76
CLIC4Q9Y696 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 Z69720.1-201ENST00000601483 472 ntBASIC19.81■□□□□ 0.76
CLIC4Q9Y696 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 AL358472.4-201ENST00000633140 710 ntBASIC19.81■□□□□ 0.76
CLIC4Q9Y696 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 UBALD1-205ENST00000590891 2641 ntBASIC19.81■□□□□ 0.76
CLIC4Q9Y696 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLIC4Q9Y696 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 AC096582.2-201ENST00000510860 516 ntBASIC19.8■□□□□ 0.76
CLIC4Q9Y696 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms