Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB2Q9Y5E7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 AC108751.1-201ENST00000490852 363 ntBASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB2Q9Y5E7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 MYCLP1-201ENST00000372451 1075 ntBASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 RNA5SP416-201ENST00000516838 111 ntBASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 LINC00304-203ENST00000565008 1864 ntBASIC18.99■□□□□ 0.63
PCDHB2Q9Y5E7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 REXO1L11P-201ENST00000620964 1927 ntBASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 MIR1233-2-201ENST00000408138 82 ntBASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 MIR1233-1-201ENST00000408722 82 ntBASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 AC005104.2-201ENST00000427818 678 ntBASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB2Q9Y5E7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms