Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 AL359075.1-203ENST00000462729 1002 ntBASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 AC010240.3-201ENST00000607688 395 ntBASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 AC010331.1-201ENST00000611423 582 ntBASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HCC1Q9Y3T6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 SEC1P-202ENST00000473944 940 ntBASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 KRT18P41-201ENST00000518924 1277 ntBASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 MIR3180-4-201ENST00000582223 153 ntBASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HCC1Q9Y3T6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 STARP1-201ENST00000397973 869 ntBASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 FAM8A6P-201ENST00000407496 1135 ntBASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 AC087388.1-201ENST00000571370 1112 ntBASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
R3HCC1Q9Y3T6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms