Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 AC243562.1-201ENST00000560672 389 ntBASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 AC012645.4-201ENST00000610691 1061 ntBASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC25.55■■□□□ 1.68
SHANK2Q9UPX8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 AC116353.5-201ENST00000638148 1699 ntBASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHANK2Q9UPX8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 TFAMP1-201ENST00000412727 736 ntBASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 MTRF1LP2-201ENST00000506027 1122 ntBASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 AC051619.7-201ENST00000568314 623 ntBASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 AL031055.1-201ENST00000606362 631 ntBASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 AP001059.3-201ENST00000619053 235 ntBASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 AC087289.5-201ENST00000586076 3175 ntBASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 GK-202ENST00000378941 458 ntTSL 3 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SHANK2Q9UPX8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 SPCS2P4-201ENST00000436160 681 ntBASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 AL390955.2-201ENST00000603032 514 ntBASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 AL161645.1-201ENST00000622716 1255 ntBASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC25.52■■□□□ 1.68
SHANK2Q9UPX8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
SHANK2Q9UPX8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 AL138688.1-201ENST00000624851 1594 ntBASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 AL512356.2-201ENST00000546955 174 ntBASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
SHANK2Q9UPX8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SHANK2Q9UPX8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SHANK2Q9UPX8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC25.5■■□□□ 1.67
SHANK2Q9UPX8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC25.5■■□□□ 1.67
SHANK2Q9UPX8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SHANK2Q9UPX8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SHANK2Q9UPX8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC25.5■■□□□ 1.67
SHANK2Q9UPX8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms