Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 AC068880.1-201ENST00000507289 2297 ntBASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN1Q9UMX0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 AC016396.2-201ENST00000562575 1417 ntBASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 MIR940-201ENST00000401276 94 ntBASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBQLN1Q9UMX0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 PI4KAP1-204ENST00000612579 1703 ntBASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 PMS2P7-201ENST00000506558 1336 ntBASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UBQLN1Q9UMX0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 PRSS29P-201ENST00000440800 595 ntBASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 KRT18P3-201ENST00000451602 1288 ntBASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 MIR4751-201ENST00000578027 74 ntBASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN1Q9UMX0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 MRPL20P1-201ENST00000400819 433 ntBASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 CRYGEP-201ENST00000412192 528 ntBASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.57■□□□□ 0.56
UBQLN1Q9UMX0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms