Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 REXO1L9P-201ENST00000604264 2108 ntBASIC21.91■■□□□ 1.1
CCNL1Q9UK58 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCNL1Q9UK58 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNL1Q9UK58 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.89■■□□□ 1.1
CCNL1Q9UK58 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNL1Q9UK58 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNL1Q9UK58 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCNL1Q9UK58 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 AC109635.5-201ENST00000533593 962 ntBASIC21.89■■□□□ 1.09
CCNL1Q9UK58 AC005412.3-201ENST00000580309 715 ntBASIC21.89■■□□□ 1.09
CCNL1Q9UK58 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 MIR6752-201ENST00000618442 71 ntBASIC21.89■■□□□ 1.09
CCNL1Q9UK58 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
CCNL1Q9UK58 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 MIR4453-201ENST00000584019 89 ntBASIC21.88■■□□□ 1.09
CCNL1Q9UK58 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 AC009118.2-201ENST00000613275 655 ntBASIC21.88■■□□□ 1.09
CCNL1Q9UK58 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 AC012569.1-201ENST00000591191 1524 ntBASIC21.88■■□□□ 1.09
CCNL1Q9UK58 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.88■■□□□ 1.09
CCNL1Q9UK58 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.87■■□□□ 1.09
CCNL1Q9UK58 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.87■■□□□ 1.09
CCNL1Q9UK58 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCNL1Q9UK58 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNL1Q9UK58 AP000842.3-202ENST00000569238 1080 ntBASIC21.87■■□□□ 1.09
CCNL1Q9UK58 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.87■■□□□ 1.09
CCNL1Q9UK58 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.87■■□□□ 1.09
CCNL1Q9UK58 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCNL1Q9UK58 WASH6P-202ENST00000359512 1437 ntBASIC21.87■■□□□ 1.09
CCNL1Q9UK58 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNL1Q9UK58 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCNL1Q9UK58 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.86■■□□□ 1.09
CCNL1Q9UK58 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms