Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 TPM4P1-201ENST00000436100 807 ntBASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 GMCL1P1-201ENST00000463439 1581 ntBASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.04■□□□□ 0.64
CALCOCO1Q9P1Z2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CALCOCO1Q9P1Z2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 ATP5G2P1-201ENST00000433580 426 ntBASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 AC009065.1-201ENST00000564055 1225 ntBASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALCOCO1Q9P1Z2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CALCOCO1Q9P1Z2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms