Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 PCDHA12-202ENST00000613593 2588 ntBASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 RPS2P28-201ENST00000314255 741 ntBASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 AC008608.2-201ENST00000606089 416 ntBASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKIPSDQ9NZQ3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 LINC00602-201ENST00000629776 2065 ntBASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 AC068472.1-201ENST00000474589 881 ntBASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 TP73-AS1-210ENST00000637775 1455 ntBASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 AP001094.4-201ENST00000579008 2176 ntBASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKIPSDQ9NZQ3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms