Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 IL9RP2-201ENST00000423948 1312 ntBASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 AC006504.4-201ENST00000592118 1568 ntBASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 AC073621.1-201ENST00000392730 636 ntBASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 ELK2BP-201ENST00000415014 1224 ntBASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 PCDHB18P-201ENST00000524813 2368 ntBASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SPHK1Q9NYA1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AL138688.1-201ENST00000624851 1594 ntBASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AP000347.1-202ENST00000435868 847 ntBASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AC006557.2-201ENST00000592985 1240 ntBASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AL353135.1-201ENST00000606729 504 ntBASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AL139424.1-201ENST00000607572 797 ntBASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AC120114.3-201ENST00000611923 658 ntBASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.72■□□□□ 0.27
SPHK1Q9NYA1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 AC098831.1-202ENST00000438821 336 ntBASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 SLC25A1P1-201ENST00000528351 927 ntBASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 BX640515.1-201ENST00000617215 977 ntBASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms