Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 GPR89P-201ENST00000407924 1495 ntBASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 AC105339.3-201ENST00000560043 636 ntBASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 AL049840.3-201ENST00000602669 611 ntBASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 EGFEM1P-202ENST00000431685 1563 ntBASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 AC006504.4-201ENST00000592118 1568 ntBASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 ELK2BP-201ENST00000415014 1224 ntBASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM248Q9NWD8 HTR7P1-202ENST00000624664 4411 ntBASIC17.71■□□□□ 0.42
TMEM248Q9NWD8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM248Q9NWD8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM248Q9NWD8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TMEM248Q9NWD8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM248Q9NWD8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM248Q9NWD8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM248Q9NWD8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
TMEM248Q9NWD8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms