Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ECHDC1Q9NTX5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
ECHDC1Q9NTX5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
ECHDC1Q9NTX5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 NCF1C-201ENST00000438382 1427 ntBASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 TPM4P1-201ENST00000436100 807 ntBASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 AL160237.2-201ENST00000556165 472 ntBASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 AL353135.1-201ENST00000606729 504 ntBASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ECHDC1Q9NTX5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 AC018712.1-201ENST00000455767 687 ntBASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 AC073648.2-201ENST00000510116 352 ntBASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 AP002469.2-201ENST00000531724 424 ntBASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 AP001094.4-201ENST00000579008 2176 ntBASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ECHDC1Q9NTX5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 EGFEM1P-202ENST00000431685 1563 ntBASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 RPS2P1-201ENST00000434010 821 ntBASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 AC139887.3-201ENST00000568585 713 ntBASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 LINC02012-201ENST00000608206 1725 ntBASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms