Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 AL355312.1-201ENST00000407115 2176 ntBASIC20.85■□□□□ 0.93
SALL1Q9NSC2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 LYSMD4-203ENST00000378904 2122 ntBASIC20.85■□□□□ 0.93
SALL1Q9NSC2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 AP001160.2-201ENST00000596071 487 ntBASIC20.85■□□□□ 0.93
SALL1Q9NSC2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SALL1Q9NSC2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 AP006288.1-201ENST00000446065 395 ntBASIC20.84■□□□□ 0.93
SALL1Q9NSC2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 AC134684.3-201ENST00000641758 218 ntBASIC20.84■□□□□ 0.93
SALL1Q9NSC2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.84■□□□□ 0.93
SALL1Q9NSC2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 ALG1L5P-201ENST00000482043 771 ntBASIC20.83■□□□□ 0.93
SALL1Q9NSC2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 C20orf181-201ENST00000623918 480 ntBASIC20.83■□□□□ 0.93
SALL1Q9NSC2 AC004877.2-201ENST00000623941 599 ntBASIC20.83■□□□□ 0.93
SALL1Q9NSC2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 AC133963.1-201ENST00000504166 1679 ntBASIC20.83■□□□□ 0.93
SALL1Q9NSC2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SALL1Q9NSC2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.83■□□□□ 0.92
SALL1Q9NSC2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
SALL1Q9NSC2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.83■□□□□ 0.92
SALL1Q9NSC2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SALL1Q9NSC2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.83■□□□□ 0.92
SALL1Q9NSC2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.83■□□□□ 0.92
SALL1Q9NSC2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.83■□□□□ 0.92
SALL1Q9NSC2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms