Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 RN7SL510P-201ENST00000581311 263 ntBASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 AL139288.1-201ENST00000623748 933 ntBASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SDHAF3Q9NRP4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 AC079776.2-201ENST00000641154 1609 ntBASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 AC067852.2-201ENST00000590513 2313 ntBASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 AC009336.1-201ENST00000608941 1553 ntBASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 AL138688.1-201ENST00000624851 1594 ntBASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 SIGLEC16-201ENST00000599858 1437 ntBASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 AC132938.5-201ENST00000624980 1813 ntBASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 UNC93B7-201ENST00000509439 705 ntBASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 MST1L-201ENST00000442552 2185 ntBASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SDHAF3Q9NRP4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 SPDYE21P-201ENST00000413323 827 ntBASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SDHAF3Q9NRP4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms