Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL1Q9NR64 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
KLHL1Q9NR64 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL1Q9NR64 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.41■□□□□ 0.22
KLHL1Q9NR64 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KLHL1Q9NR64 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 AC125634.1-201ENST00000438758 1403 ntBASIC16.4■□□□□ 0.22
KLHL1Q9NR64 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.4■□□□□ 0.22
KLHL1Q9NR64 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 AC120114.3-201ENST00000611923 658 ntBASIC16.4■□□□□ 0.22
KLHL1Q9NR64 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHL1Q9NR64 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 PRORSD1P-202ENST00000563365 2154 ntBASIC16.39■□□□□ 0.21
KLHL1Q9NR64 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 AF186996.4-201ENST00000467186 377 ntBASIC16.39■□□□□ 0.21
KLHL1Q9NR64 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 AP001005.1-201ENST00000571755 1248 ntBASIC16.39■□□□□ 0.21
KLHL1Q9NR64 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 MTDHP3-201ENST00000594186 672 ntBASIC16.39■□□□□ 0.21
KLHL1Q9NR64 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 AL773604.1-201ENST00000617417 272 ntBASIC16.39■□□□□ 0.21
KLHL1Q9NR64 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.39■□□□□ 0.21
KLHL1Q9NR64 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KLHL1Q9NR64 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
KLHL1Q9NR64 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KLHL1Q9NR64 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.38■□□□□ 0.21
KLHL1Q9NR64 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KLHL1Q9NR64 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KLHL1Q9NR64 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
KLHL1Q9NR64 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KLHL1Q9NR64 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms