Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 AC134043.2-201ENST00000624206 2238 ntBASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 SIGLEC30P-201ENST00000455569 941 ntBASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 HLA-J-202ENST00000469281 1241 ntBASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 AL139327.4-201ENST00000612362 153 ntBASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 AC068880.1-201ENST00000507289 2297 ntBASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM7Q9NR12 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 AC023141.5-201ENST00000458585 616 ntBASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 AC190387.1-201ENST00000551683 408 ntBASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 AC022145.2-201ENST00000598203 171 ntBASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 AC023141.13-201ENST00000604991 943 ntBASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM7Q9NR12 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM7Q9NR12 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 AC069262.1-201ENST00000539058 672 ntBASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 LINC00628-201ENST00000628516 1289 ntBASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 AC007064.4-201ENST00000637740 555 ntBASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 AF228730.6-201ENST00000641497 218 ntBASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 AC084121.3-201ENST00000641716 218 ntBASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 AC105233.6-201ENST00000642093 218 ntBASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PDLIM7Q9NR12 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 PTCHD3P3-201ENST00000403073 906 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms