Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 AL121672.3-201ENST00000608644 468 ntBASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 AL691432.3-201ENST00000621860 400 ntBASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 AC116407.4-201ENST00000623319 1061 ntBASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 AC093525.9-201ENST00000624961 1746 ntBASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.74■□□□□ 0.91
UPF3BQ9BZI7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 AGGF1P2-201ENST00000426656 2106 ntBASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 DUSP5P1-201ENST00000441325 1139 ntBASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 AC122714.2-201ENST00000502787 707 ntBASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 IGHV3-52-201ENST00000519770 353 ntBASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 UBALD1-205ENST00000590891 2641 ntBASIC20.73■□□□□ 0.91
UPF3BQ9BZI7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 AC124067.4-201ENST00000519691 2379 ntBASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 AC005915.1-201ENST00000624912 2018 ntBASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 AP002383.4-201ENST00000442518 975 ntBASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UPF3BQ9BZI7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms