Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 INGX-202ENST00000489074 768 ntBASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 LINC01225-203ENST00000563550 1244 ntBASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 TUBB3P1-201ENST00000405796 1332 ntBASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTFDC1Q9BY42 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 AC015922.1-201ENST00000421102 1152 ntBASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 KRT18P32-201ENST00000424695 1287 ntBASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 AC084121.4-201ENST00000641598 221 ntBASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 AF228730.8-201ENST00000642140 221 ntBASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.94■□□□□ 0.94
RTFDC1Q9BY42 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 MIR661-201ENST00000384842 89 ntBASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 BASP1P1-201ENST00000430708 665 ntBASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 SPCS2P4-201ENST00000436160 681 ntBASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 DUX4L17-201ENST00000557360 1267 ntBASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 ABALON-201ENST00000629058 1903 ntBASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTFDC1Q9BY42 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 KLF2P3-201ENST00000451977 1087 ntBASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms