Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 AL135999.2-201ENST00000622438 1686 ntBASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 FAM197Y8-203ENST00000450145 560 ntBASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 AC073648.2-201ENST00000510116 352 ntBASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 AC139713.2-201ENST00000641328 2723 ntBASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2Q9BSQ5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 AF186996.4-201ENST00000467186 377 ntBASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 AP002469.2-201ENST00000531724 424 ntBASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 MTDHP4-201ENST00000600287 670 ntBASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 AL121894.2-201ENST00000602977 491 ntBASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2Q9BSQ5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2Q9BSQ5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2Q9BSQ5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.08■□□□□ 0.33
CCM2Q9BSQ5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2Q9BSQ5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 AL662844.1-201ENST00000546340 181 ntBASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 CROCCP2-202ENST00000412962 2773 ntBASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms