Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PTPN18Q99952 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN18Q99952 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PTPN18Q99952 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.72■□□□□ 0.75
PTPN18Q99952 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN18Q99952 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTPN18Q99952 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPN18Q99952 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PTPN18Q99952 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN18Q99952 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN18Q99952 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN18Q99952 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPN18Q99952 MIR6752-201ENST00000618442 71 ntBASIC19.72■□□□□ 0.75
PTPN18Q99952 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PTPN18Q99952 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN18Q99952 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTPN18Q99952 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN18Q99952 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN18Q99952 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PTPN18Q99952 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN18Q99952 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN18Q99952 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.71■□□□□ 0.75
PTPN18Q99952 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTPN18Q99952 AC109635.5-201ENST00000533593 962 ntBASIC19.71■□□□□ 0.75
PTPN18Q99952 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.71■□□□□ 0.75
PTPN18Q99952 AP000842.3-202ENST00000569238 1080 ntBASIC19.71■□□□□ 0.75
PTPN18Q99952 AL590560.3-201ENST00000623350 461 ntBASIC19.71■□□□□ 0.75
PTPN18Q99952 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN18Q99952 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTPN18Q99952 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN18Q99952 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN18Q99952 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN18Q99952 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PTPN18Q99952 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PTPN18Q99952 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PTPN18Q99952 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN18Q99952 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPN18Q99952 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PTPN18Q99952 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPN18Q99952 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN18Q99952 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTPN18Q99952 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 AC012569.1-201ENST00000591191 1524 ntBASIC19.7■□□□□ 0.74
PTPN18Q99952 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN18Q99952 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN18Q99952 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPN18Q99952 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN18Q99952 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 AC100757.3-201ENST00000622361 1406 ntBASIC19.69■□□□□ 0.74
PTPN18Q99952 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN18Q99952 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PTPN18Q99952 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.69■□□□□ 0.74
PTPN18Q99952 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.69■□□□□ 0.74
PTPN18Q99952 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN18Q99952 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 AC008267.7-201ENST00000624570 1194 ntBASIC19.69■□□□□ 0.74
PTPN18Q99952 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN18Q99952 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PTPN18Q99952 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN18Q99952 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN18Q99952 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN18Q99952 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN18Q99952 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN18Q99952 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN18Q99952 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN18Q99952 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN18Q99952 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN18Q99952 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms