Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 TSPY12P-201ENST00000421279 868 ntBASIC16.18■□□□□ 0.18
TM9SF2Q99805 FAAHP1-202ENST00000446499 1238 ntBASIC16.18■□□□□ 0.18
TM9SF2Q99805 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 AC091304.2-201ENST00000564639 760 ntBASIC16.18■□□□□ 0.18
TM9SF2Q99805 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 AL121894.2-201ENST00000602977 491 ntBASIC16.18■□□□□ 0.18
TM9SF2Q99805 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.18■□□□□ 0.18
TM9SF2Q99805 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.18■□□□□ 0.18
TM9SF2Q99805 AL596257.1-201ENST00000641463 2694 ntBASIC16.18■□□□□ 0.18
TM9SF2Q99805 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TM9SF2Q99805 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 AL024508.2-201ENST00000607749 1894 ntBASIC16.17■□□□□ 0.18
TM9SF2Q99805 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 TSPY19P-201ENST00000418461 509 ntBASIC16.17■□□□□ 0.18
TM9SF2Q99805 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 TSPY18P-201ENST00000441642 509 ntBASIC16.17■□□□□ 0.18
TM9SF2Q99805 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 LINC00167-201ENST00000530583 1419 ntBASIC16.17■□□□□ 0.18
TM9SF2Q99805 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TM9SF2Q99805 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TM9SF2Q99805 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 FOSL1P1-201ENST00000511041 816 ntBASIC16.16■□□□□ 0.18
TM9SF2Q99805 RN7SL510P-201ENST00000581311 263 ntBASIC16.16■□□□□ 0.18
TM9SF2Q99805 AC099336.1-202ENST00000602961 463 ntBASIC16.16■□□□□ 0.18
TM9SF2Q99805 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TM9SF2Q99805 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM9SF2Q99805 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms