Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMKLR1Q99788 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMKLR1Q99788 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CMKLR1Q99788 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CMKLR1Q99788 AC135776.1-201ENST00000319817 2481 ntBASIC16.62■□□□□ 0.25
CMKLR1Q99788 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMKLR1Q99788 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMKLR1Q99788 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CMKLR1Q99788 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.62■□□□□ 0.25
CMKLR1Q99788 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CMKLR1Q99788 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.62■□□□□ 0.25
CMKLR1Q99788 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMKLR1Q99788 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMKLR1Q99788 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMKLR1Q99788 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.62■□□□□ 0.25
CMKLR1Q99788 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CMKLR1Q99788 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.62■□□□□ 0.25
CMKLR1Q99788 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMKLR1Q99788 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 AC018470.1-201ENST00000624790 3129 ntBASIC16.61■□□□□ 0.25
CMKLR1Q99788 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 ELL2P1-201ENST00000413990 1906 ntBASIC16.61■□□□□ 0.25
CMKLR1Q99788 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 LINC00982-205ENST00000420957 435 ntBASIC16.61■□□□□ 0.25
CMKLR1Q99788 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 AL353135.1-201ENST00000606729 504 ntBASIC16.61■□□□□ 0.25
CMKLR1Q99788 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CMKLR1Q99788 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMKLR1Q99788 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 CNN2P11-201ENST00000429351 262 ntBASIC16.6■□□□□ 0.25
CMKLR1Q99788 CEND1P1-201ENST00000451006 455 ntBASIC16.6■□□□□ 0.25
CMKLR1Q99788 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 PDPK2P-202ENST00000562415 1191 ntBASIC16.6■□□□□ 0.25
CMKLR1Q99788 AL078644.1-201ENST00000609881 752 ntBASIC16.6■□□□□ 0.25
CMKLR1Q99788 AC004877.2-201ENST00000623941 599 ntBASIC16.6■□□□□ 0.25
CMKLR1Q99788 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 AC007064.4-201ENST00000637740 555 ntBASIC16.6■□□□□ 0.25
CMKLR1Q99788 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.6■□□□□ 0.25
CMKLR1Q99788 LETM1P2-201ENST00000597330 2178 ntBASIC16.6■□□□□ 0.25
CMKLR1Q99788 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMKLR1Q99788 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMKLR1Q99788 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMKLR1Q99788 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
CMKLR1Q99788 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMKLR1Q99788 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.59■□□□□ 0.25
CMKLR1Q99788 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMKLR1Q99788 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMKLR1Q99788 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMKLR1Q99788 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMKLR1Q99788 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.59■□□□□ 0.25
CMKLR1Q99788 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.59■□□□□ 0.25
CMKLR1Q99788 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMKLR1Q99788 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMKLR1Q99788 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms