Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NPAS2Q99743 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NPAS2Q99743 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.04■□□□□ 0.32
NPAS2Q99743 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.04■□□□□ 0.32
NPAS2Q99743 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.04■□□□□ 0.32
NPAS2Q99743 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS2Q99743 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS2Q99743 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NPAS2Q99743 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NPAS2Q99743 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
NPAS2Q99743 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NPAS2Q99743 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 AP002383.4-201ENST00000442518 975 ntBASIC17.03■□□□□ 0.32
NPAS2Q99743 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS2Q99743 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS2Q99743 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 MIR3180-1-201ENST00000580374 94 ntBASIC17.03■□□□□ 0.32
NPAS2Q99743 MIR3180-3-201ENST00000584616 94 ntBASIC17.03■□□□□ 0.32
NPAS2Q99743 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 AC092119.3-201ENST00000612618 583 ntBASIC17.03■□□□□ 0.32
NPAS2Q99743 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS2Q99743 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS2Q99743 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
NPAS2Q99743 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS2Q99743 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NPAS2Q99743 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 CICP6-201ENST00000457191 2729 ntBASIC17.02■□□□□ 0.32
NPAS2Q99743 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NPAS2Q99743 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS2Q99743 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS2Q99743 DUSP5P1-201ENST00000441325 1139 ntBASIC17.02■□□□□ 0.32
NPAS2Q99743 TSSC2-201ENST00000450217 709 ntBASIC17.02■□□□□ 0.32
NPAS2Q99743 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.02■□□□□ 0.32
NPAS2Q99743 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS2Q99743 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms