Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS1Q99742 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS1Q99742 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS1Q99742 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NPAS1Q99742 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS1Q99742 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.86■□□□□ 0.13
NPAS1Q99742 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS1Q99742 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS1Q99742 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS1Q99742 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS1Q99742 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS1Q99742 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS1Q99742 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS1Q99742 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NPAS1Q99742 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS1Q99742 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS1Q99742 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS1Q99742 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
NPAS1Q99742 CROCCP2-202ENST00000412962 2773 ntBASIC15.85■□□□□ 0.13
NPAS1Q99742 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS1Q99742 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS1Q99742 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS1Q99742 SAPCD2P3-201ENST00000455031 850 ntBASIC15.85■□□□□ 0.13
NPAS1Q99742 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS1Q99742 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS1Q99742 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.85■□□□□ 0.13
NPAS1Q99742 AC008608.2-201ENST00000606089 416 ntBASIC15.85■□□□□ 0.13
NPAS1Q99742 AL139327.4-201ENST00000612362 153 ntBASIC15.85■□□□□ 0.13
NPAS1Q99742 TP73-AS1-207ENST00000624167 988 ntBASIC15.85■□□□□ 0.13
NPAS1Q99742 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NPAS1Q99742 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS1Q99742 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS1Q99742 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS1Q99742 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NPAS1Q99742 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS1Q99742 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS1Q99742 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.84■□□□□ 0.13
NPAS1Q99742 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
NPAS1Q99742 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.84■□□□□ 0.13
NPAS1Q99742 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.84■□□□□ 0.13
NPAS1Q99742 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.84■□□□□ 0.13
NPAS1Q99742 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
NPAS1Q99742 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.84■□□□□ 0.13
NPAS1Q99742 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.84■□□□□ 0.13
NPAS1Q99742 BX005266.1-201ENST00000473402 457 ntBASIC15.84■□□□□ 0.13
NPAS1Q99742 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 SART3-203ENST00000546611 1184 ntBASIC15.84■□□□□ 0.13
NPAS1Q99742 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.84■□□□□ 0.13
NPAS1Q99742 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.84■□□□□ 0.13
NPAS1Q99742 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.84■□□□□ 0.13
NPAS1Q99742 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.84■□□□□ 0.13
NPAS1Q99742 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.84■□□□□ 0.13
NPAS1Q99742 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 AL031008.1-201ENST00000619963 541 ntBASIC15.84■□□□□ 0.13
NPAS1Q99742 AL355877.3-201ENST00000622820 899 ntBASIC15.84■□□□□ 0.13
NPAS1Q99742 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NPAS1Q99742 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.84■□□□□ 0.13
NPAS1Q99742 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NPAS1Q99742 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.84■□□□□ 0.13
NPAS1Q99742 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.84■□□□□ 0.13
NPAS1Q99742 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.84■□□□□ 0.13
NPAS1Q99742 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS1Q99742 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS1Q99742 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
NPAS1Q99742 AL645608.8-201ENST00000606034 2086 ntBASIC15.83■□□□□ 0.13
NPAS1Q99742 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS1Q99742 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.83■□□□□ 0.13
NPAS1Q99742 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS1Q99742 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS1Q99742 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS1Q99742 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS1Q99742 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPAS1Q99742 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms