Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 RNA5SP419-201ENST00000515908 135 ntBASIC17.92■□□□□ 0.46
RPRD1AQ96P16 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 AC139887.3-201ENST00000568585 713 ntBASIC17.92■□□□□ 0.46
RPRD1AQ96P16 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 AL049840.3-201ENST00000602669 611 ntBASIC17.92■□□□□ 0.46
RPRD1AQ96P16 MIR7706-201ENST00000613747 67 ntBASIC17.92■□□□□ 0.46
RPRD1AQ96P16 AL589182.2-201ENST00000619332 1049 ntBASIC17.92■□□□□ 0.46
RPRD1AQ96P16 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.92■□□□□ 0.46
RPRD1AQ96P16 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 NCF1C-201ENST00000438382 1427 ntBASIC17.91■□□□□ 0.46
RPRD1AQ96P16 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 AL135999.2-201ENST00000622438 1686 ntBASIC17.91■□□□□ 0.46
RPRD1AQ96P16 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPRD1AQ96P16 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 AC008735.5-201ENST00000623544 497 ntBASIC17.9■□□□□ 0.46
RPRD1AQ96P16 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPRD1AQ96P16 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RPRD1AQ96P16 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
RPRD1AQ96P16 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RPRD1AQ96P16 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RPRD1AQ96P16 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.89■□□□□ 0.46
RPRD1AQ96P16 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 LINC00896-202ENST00000609602 2128 ntBASIC17.89■□□□□ 0.45
RPRD1AQ96P16 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms