Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 AC145285.6-201ENST00000604632 637 ntBASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 AC140113.3-201ENST00000605663 199 ntBASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 PCDHA1-201ENST00000378133 2726 ntBASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 AC019129.2-201ENST00000609837 1235 ntBASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 HYMAI-201ENST00000635591 3347 ntBASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHAMP1Q96JM3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 AC006449.5-201ENST00000610658 2098 ntBASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 SPDYE13P-201ENST00000445314 798 ntBASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 AP003733.1-201ENST00000491725 852 ntBASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHAMP1Q96JM3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 PCDHB17P-201ENST00000539533 2393 ntBASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 AC096633.1-201ENST00000422446 749 ntBASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 AC117947.1-201ENST00000427448 529 ntBASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 COX11P1-201ENST00000489116 835 ntBASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHAMP1Q96JM3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms