Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN23Q96B33 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 MIR346-201ENST00000362234 95 ntBASIC17.2■□□□□ 0.34
CLDN23Q96B33 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 AC241585.1-201ENST00000433527 519 ntBASIC17.2■□□□□ 0.34
CLDN23Q96B33 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 AC008267.7-201ENST00000624570 1194 ntBASIC17.2■□□□□ 0.34
CLDN23Q96B33 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 AC012569.1-201ENST00000591191 1524 ntBASIC17.2■□□□□ 0.34
CLDN23Q96B33 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN23Q96B33 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN23Q96B33 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 MRPS18AP1-201ENST00000414458 589 ntBASIC17.19■□□□□ 0.34
CLDN23Q96B33 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 AL139327.4-201ENST00000612362 153 ntBASIC17.19■□□□□ 0.34
CLDN23Q96B33 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN23Q96B33 AP000997.3-201ENST00000623333 2250 ntBASIC17.19■□□□□ 0.34
CLDN23Q96B33 WASH6P-202ENST00000359512 1437 ntBASIC17.19■□□□□ 0.34
CLDN23Q96B33 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN23Q96B33 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 HLA-V-201ENST00000429037 534 ntBASIC17.18■□□□□ 0.34
CLDN23Q96B33 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 AP000842.3-202ENST00000569238 1080 ntBASIC17.18■□□□□ 0.34
CLDN23Q96B33 AC009118.2-201ENST00000613275 655 ntBASIC17.18■□□□□ 0.34
CLDN23Q96B33 MIR6752-201ENST00000618442 71 ntBASIC17.18■□□□□ 0.34
CLDN23Q96B33 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 GNAS-203ENST00000306120 1878 ntBASIC17.18■□□□□ 0.34
CLDN23Q96B33 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN23Q96B33 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN23Q96B33 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN23Q96B33 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN23Q96B33 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms