Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RPGRQ92834 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPGRQ92834 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RPGRQ92834 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.28■■□□□ 1
RPGRQ92834 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.28■■□□□ 1
RPGRQ92834 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.28■■□□□ 1
RPGRQ92834 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.28■■□□□ 1
RPGRQ92834 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 AL592309.1-201ENST00000443127 649 ntBASIC21.28■■□□□ 1
RPGRQ92834 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.28■■□□□ 1
RPGRQ92834 MIR4745-201ENST00000577608 62 ntBASIC21.28■■□□□ 1
RPGRQ92834 AC015911.4-201ENST00000588022 1070 ntBASIC21.28■■□□□ 1
RPGRQ92834 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.28■■□□□ 1
RPGRQ92834 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.28■■□□□ 1
RPGRQ92834 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RPGRQ92834 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.28■■□□□ 1
RPGRQ92834 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRQ92834 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.28■■□□□ 1
RPGRQ92834 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RPGRQ92834 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRQ92834 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRQ92834 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.27■■□□□ 1
RPGRQ92834 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRQ92834 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRQ92834 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPGRQ92834 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.27■■□□□ 1
RPGRQ92834 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RPGRQ92834 RN7SL589P-201ENST00000481268 310 ntBASIC21.27■■□□□ 1
RPGRQ92834 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPGRQ92834 AC107918.2-201ENST00000530817 355 ntBASIC21.27■■□□□ 1
RPGRQ92834 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.27■■□□□ 1
RPGRQ92834 DUX4L27-201ENST00000554796 1261 ntBASIC21.27■■□□□ 1
RPGRQ92834 AC239800.4-201ENST00000603712 296 ntBASIC21.27■■□□□ 1
RPGRQ92834 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.27■■□□□ 1
RPGRQ92834 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRQ92834 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.27■■□□□ 1
RPGRQ92834 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRQ92834 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPGRQ92834 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.27■■□□□ 1
RPGRQ92834 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
RPGRQ92834 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RPGRQ92834 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RPGRQ92834 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.26■□□□□ 0.99
RPGRQ92834 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.26■□□□□ 0.99
RPGRQ92834 AC020763.4-201ENST00000623414 4170 ntBASIC21.26■□□□□ 0.99
RPGRQ92834 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RPGRQ92834 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.26■□□□□ 0.99
RPGRQ92834 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.26■□□□□ 0.99
RPGRQ92834 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 KRT18P32-201ENST00000424695 1287 ntBASIC21.26■□□□□ 0.99
RPGRQ92834 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.26■□□□□ 0.99
RPGRQ92834 AC079140.1-201ENST00000508039 487 ntBASIC21.26■□□□□ 0.99
RPGRQ92834 AC093214.1-201ENST00000511688 1107 ntBASIC21.26■□□□□ 0.99
RPGRQ92834 RNA5SP421-201ENST00000516864 134 ntBASIC21.26■□□□□ 0.99
RPGRQ92834 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.26■□□□□ 0.99
RPGRQ92834 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.26■□□□□ 0.99
RPGRQ92834 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.26■□□□□ 0.99
RPGRQ92834 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRQ92834 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRQ92834 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRQ92834 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.25■□□□□ 0.99
RPGRQ92834 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRQ92834 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRQ92834 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRQ92834 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRQ92834 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.25■□□□□ 0.99
RPGRQ92834 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRQ92834 TFAMP1-201ENST00000412727 736 ntBASIC21.25■□□□□ 0.99
RPGRQ92834 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.25■□□□□ 0.99
RPGRQ92834 CNN2P2-201ENST00000443536 909 ntBASIC21.25■□□□□ 0.99
RPGRQ92834 CNN2P3-201ENST00000450201 906 ntBASIC21.25■□□□□ 0.99
RPGRQ92834 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRQ92834 AC069262.1-201ENST00000539058 672 ntBASIC21.25■□□□□ 0.99
RPGRQ92834 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms