Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 SPDYE9P-201ENST00000570642 692 ntBASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 AC005498.2-205ENST00000593218 784 ntBASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 SPDYE10P-202ENST00000612005 668 ntBASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 SPDYE8P-202ENST00000612377 668 ntBASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 AL035633.1-201ENST00000406139 838 ntBASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 AC005237.2-201ENST00000434368 219 ntBASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF4Q8WZA2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 BCL2-203ENST00000589955 5011 ntBASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 AC104581.1-202ENST00000635932 2618 ntBASIC22.61■■□□□ 1.21
RAPGEF4Q8WZA2 AC020763.4-201ENST00000623414 4170 ntBASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 AC015911.4-201ENST00000588022 1070 ntBASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RAPGEF4Q8WZA2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
RAPGEF4Q8WZA2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.59■■□□□ 1.21
RAPGEF4Q8WZA2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAPGEF4Q8WZA2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms