Protein–RNA interactions for Protein: Q8TDX6

CSGALNACT1, Chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1Q8TDX6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.86■□□□□ 0.45
CSGALNACT1Q8TDX6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSGALNACT1Q8TDX6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSGALNACT1Q8TDX6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 AC106028.4-201ENST00000614509 607 ntBASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSGALNACT1Q8TDX6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 AP000344.2-201ENST00000512987 629 ntBASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 MIR3197-201ENST00000582241 73 ntBASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CSGALNACT1Q8TDX6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSGALNACT1Q8TDX6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.83■□□□□ 0.44
CSGALNACT1Q8TDX6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms