Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF548Q8NEK5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 KRT18P27-201ENST00000427733 1299 ntBASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 KRT18P3-201ENST00000451602 1288 ntBASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 PRYP5-201ENST00000451909 266 ntBASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 AC006557.2-201ENST00000592985 1240 ntBASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 MIR1199-201ENST00000621445 119 ntBASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 AC006116.8-202ENST00000587620 1550 ntBASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF548Q8NEK5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF548Q8NEK5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNF548Q8NEK5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF548Q8NEK5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNF548Q8NEK5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNF548Q8NEK5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
ZNF548Q8NEK5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNF548Q8NEK5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF548Q8NEK5 AC012313.1-201ENST00000593393 3059 ntBASIC17.27■□□□□ 0.35
ZNF548Q8NEK5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ZNF548Q8NEK5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF548Q8NEK5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms