Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 AC246785.2-201ENST00000432512 513 ntBASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 AL157888.1-201ENST00000631930 593 ntBASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 PCDHB19P-201ENST00000570871 2371 ntBASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCAB3Q8N7B9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 RSL24D1P2-201ENST00000445584 366 ntBASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
EFCAB3Q8N7B9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 FAAHP1-202ENST00000446499 1238 ntBASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 AC087272.1-201ENST00000523624 533 ntBASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 AL365223.1-201ENST00000574864 1297 ntBASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 AL451064.1-201ENST00000607718 471 ntBASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 AC008147.4-201ENST00000617570 1204 ntBASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCAB3Q8N7B9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms