Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAM1L1Q8N609 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 AC073621.1-201ENST00000392730 636 ntBASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 AC012640.2-201ENST00000561606 901 ntBASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 GPR89P-201ENST00000407924 1495 ntBASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 AC116353.5-201ENST00000638148 1699 ntBASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAM1L1Q8N609 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
TRAM1L1Q8N609 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
TRAM1L1Q8N609 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 OR6D1P-202ENST00000641007 5290 ntBASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 ELK2BP-201ENST00000415014 1224 ntBASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 MIR1199-201ENST00000621445 119 ntBASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 PP12613-201ENST00000424958 2230 ntBASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 AC006504.4-201ENST00000592118 1568 ntBASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAM1L1Q8N609 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 AC079776.4-201ENST00000511039 504 ntBASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 AC136632.2-201ENST00000512891 861 ntBASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 AC116407.3-201ENST00000623905 1129 ntBASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 PGM5P2-202ENST00000637225 1043 ntBASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAM1L1Q8N609 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms