Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 COX20P2-201ENST00000452636 358 ntBASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEFF1Q8IYR6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TMEFF1Q8IYR6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.21■□□□□ 0.34
TMEFF1Q8IYR6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TMEFF1Q8IYR6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 AC092474.2-201ENST00000424288 719 ntBASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 FAM185BP-201ENST00000443595 716 ntBASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 LINC00628-201ENST00000628516 1289 ntBASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEFF1Q8IYR6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 ACTG1P4-201ENST00000425123 1122 ntBASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 AC023141.5-201ENST00000458585 616 ntBASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 REXO1L9P-201ENST00000604264 2108 ntBASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEFF1Q8IYR6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 AL121761.2-201ENST00000598007 1648 ntBASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 BCL2-203ENST00000589955 5011 ntBASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEFF1Q8IYR6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms