Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 AL049597.2-201ENST00000565575 961 ntBASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 CHCHD2P8-201ENST00000429873 447 ntBASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 AL121672.3-201ENST00000608644 468 ntBASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 AC105020.1-201ENST00000435356 2205 ntBASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC83Q8IWF9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 AC246785.2-201ENST00000432512 513 ntBASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 AC111152.3-201ENST00000569699 673 ntBASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 STK25P1-201ENST00000585406 838 ntBASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 UBALD1-205ENST00000590891 2641 ntBASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 FLJ38576-201ENST00000623820 2459 ntBASIC20.41■□□□□ 0.86
CCDC83Q8IWF9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms