Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 DRAXINP1-201ENST00000437611 948 ntBASIC16.03■□□□□ 0.16
ZNF550Q7Z398 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 UNC93B7-201ENST00000509439 705 ntBASIC16.03■□□□□ 0.16
ZNF550Q7Z398 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 RN7SL510P-201ENST00000581311 263 ntBASIC16.03■□□□□ 0.16
ZNF550Q7Z398 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF550Q7Z398 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 AL732292.2-201ENST00000609649 430 ntBASIC16.02■□□□□ 0.16
ZNF550Q7Z398 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ZNF550Q7Z398 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF550Q7Z398 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 AC233702.3-201ENST00000578656 1387 ntBASIC16.01■□□□□ 0.15
ZNF550Q7Z398 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 AL049757.1-201ENST00000616842 1596 ntBASIC16.01■□□□□ 0.15
ZNF550Q7Z398 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 FOSL1P1-201ENST00000511041 816 ntBASIC16.01■□□□□ 0.15
ZNF550Q7Z398 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 AC011467.2-201ENST00000598425 242 ntBASIC16.01■□□□□ 0.15
ZNF550Q7Z398 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 AC116353.5-201ENST00000638148 1699 ntBASIC16.01■□□□□ 0.15
ZNF550Q7Z398 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF550Q7Z398 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms