Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP50Q70EL3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP50Q70EL3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.27■□□□□ 0.84
USP50Q70EL3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP50Q70EL3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP50Q70EL3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP50Q70EL3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP50Q70EL3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP50Q70EL3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
USP50Q70EL3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.26■□□□□ 0.83
USP50Q70EL3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.26■□□□□ 0.83
USP50Q70EL3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP50Q70EL3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP50Q70EL3 AC138969.3-201ENST00000546612 1459 ntBASIC20.26■□□□□ 0.83
USP50Q70EL3 AC138932.2-201ENST00000548268 1459 ntBASIC20.26■□□□□ 0.83
USP50Q70EL3 AC126755.4-201ENST00000549796 1459 ntBASIC20.26■□□□□ 0.83
USP50Q70EL3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.26■□□□□ 0.83
USP50Q70EL3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP50Q70EL3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP50Q70EL3 AC098614.1-201ENST00000368528 745 ntBASIC20.26■□□□□ 0.83
USP50Q70EL3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
USP50Q70EL3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.26■□□□□ 0.83
USP50Q70EL3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USP50Q70EL3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.26■□□□□ 0.83
USP50Q70EL3 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.26■□□□□ 0.83
USP50Q70EL3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.26■□□□□ 0.83
USP50Q70EL3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP50Q70EL3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP50Q70EL3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.26■□□□□ 0.83
USP50Q70EL3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
USP50Q70EL3 HILS1-202ENST00000545329 423 ntBASIC20.26■□□□□ 0.83
USP50Q70EL3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.26■□□□□ 0.83
USP50Q70EL3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.26■□□□□ 0.83
USP50Q70EL3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.26■□□□□ 0.83
USP50Q70EL3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.26■□□□□ 0.83
USP50Q70EL3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.26■□□□□ 0.83
USP50Q70EL3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP50Q70EL3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.26■□□□□ 0.83
USP50Q70EL3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.26■□□□□ 0.83
USP50Q70EL3 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.26■□□□□ 0.83
USP50Q70EL3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.25■□□□□ 0.83
USP50Q70EL3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP50Q70EL3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.25■□□□□ 0.83
USP50Q70EL3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP50Q70EL3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP50Q70EL3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP50Q70EL3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP50Q70EL3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.25■□□□□ 0.83
USP50Q70EL3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.25■□□□□ 0.83
USP50Q70EL3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP50Q70EL3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.25■□□□□ 0.83
USP50Q70EL3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.25■□□□□ 0.83
USP50Q70EL3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.25■□□□□ 0.83
USP50Q70EL3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP50Q70EL3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
USP50Q70EL3 MIR3909-201ENST00000579518 119 ntBASIC20.25■□□□□ 0.83
USP50Q70EL3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.25■□□□□ 0.83
USP50Q70EL3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.25■□□□□ 0.83
USP50Q70EL3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP50Q70EL3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP50Q70EL3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
USP50Q70EL3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP50Q70EL3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
USP50Q70EL3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.25■□□□□ 0.83
USP50Q70EL3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.24■□□□□ 0.83
USP50Q70EL3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.24■□□□□ 0.83
USP50Q70EL3 AL353732.1-201ENST00000569618 1459 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.24■□□□□ 0.83
USP50Q70EL3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP50Q70EL3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.24■□□□□ 0.83
USP50Q70EL3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP50Q70EL3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP50Q70EL3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.24■□□□□ 0.83
USP50Q70EL3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.24■□□□□ 0.83
USP50Q70EL3 HCG4-201ENST00000418983 998 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.24■□□□□ 0.83
USP50Q70EL3 AL353779.1-201ENST00000434793 351 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 AC009477.1-201ENST00000452936 217 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 HLA-V-204ENST00000476601 1289 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 GIMAP3P-201ENST00000495150 836 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP50Q70EL3 AC010336.2-201ENST00000564226 506 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.24■□□□□ 0.83
USP50Q70EL3 AC017083.2-201ENST00000608069 979 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 AL139327.4-201ENST00000612362 153 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 AC007967.4-201ENST00000614700 386 ntBASIC20.24■□□□□ 0.83
USP50Q70EL3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.24■□□□□ 0.83
USP50Q70EL3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.24■□□□□ 0.83
USP50Q70EL3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP50Q70EL3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP50Q70EL3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.24■□□□□ 0.83
USP50Q70EL3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
USP50Q70EL3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP50Q70EL3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.24■□□□□ 0.83
USP50Q70EL3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP50Q70EL3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP50Q70EL3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.23■□□□□ 0.83
USP50Q70EL3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.23■□□□□ 0.83
USP50Q70EL3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms