Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 AL590787.1-201ENST00000568856 1315 ntBASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GDPD4Q6W3E5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 AL138688.1-201ENST00000624851 1594 ntBASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 MIR574-201ENST00000385209 96 ntBASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 AC009947.1-201ENST00000444350 727 ntBASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 AC034105.1-201ENST00000563488 319 ntBASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 AL805961.1-202ENST00000641562 540 ntBASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.4■□□□□ 0.38
GDPD4Q6W3E5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.39■□□□□ 0.38
GDPD4Q6W3E5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
GDPD4Q6W3E5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
GDPD4Q6W3E5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 PMS2P1-201ENST00000431037 1228 ntBASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 AC108751.1-201ENST00000490852 363 ntBASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 AC008667.4-201ENST00000607370 168 ntBASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDPD4Q6W3E5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 AP002414.1-201ENST00000391405 1147 ntBASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 IGHV3-65-201ENST00000523210 341 ntBASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 KRT18P58-201ENST00000527480 1120 ntBASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 AL671883.3-201ENST00000603274 991 ntBASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms