Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 SPDYE13P-201ENST00000445314 798 ntBASIC17.77■□□□□ 0.44
CASC4Q6P4E1 RN7SL850P-201ENST00000579959 291 ntBASIC17.77■□□□□ 0.44
CASC4Q6P4E1 AL139327.4-201ENST00000612362 153 ntBASIC17.77■□□□□ 0.44
CASC4Q6P4E1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 AC010460.3-201ENST00000511359 1579 ntBASIC17.77■□□□□ 0.44
CASC4Q6P4E1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASC4Q6P4E1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASC4Q6P4E1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASC4Q6P4E1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASC4Q6P4E1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASC4Q6P4E1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.77■□□□□ 0.43
CASC4Q6P4E1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CASC4Q6P4E1 NKILA-202ENST00000614771 2598 ntBASIC17.77■□□□□ 0.43
CASC4Q6P4E1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASC4Q6P4E1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CASC4Q6P4E1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 AC011676.5-201ENST00000624864 2660 ntBASIC17.76■□□□□ 0.43
CASC4Q6P4E1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 AC084018.2-201ENST00000613093 2607 ntBASIC17.76■□□□□ 0.43
CASC4Q6P4E1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.76■□□□□ 0.43
CASC4Q6P4E1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASC4Q6P4E1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 TSPY22P-201ENST00000427496 604 ntBASIC17.75■□□□□ 0.43
CASC4Q6P4E1 DUX4L26-201ENST00000489078 1255 ntBASIC17.75■□□□□ 0.43
CASC4Q6P4E1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 AL121761.2-201ENST00000598007 1648 ntBASIC17.75■□□□□ 0.43
CASC4Q6P4E1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASC4Q6P4E1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms