Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CCDC144NLQ6NUI1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCDC144NLQ6NUI1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC144NLQ6NUI1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC144NLQ6NUI1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC144NLQ6NUI1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC144NLQ6NUI1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 AC008608.2-201ENST00000606089 416 ntBASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 AL355877.3-201ENST00000622820 899 ntBASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 SIGLEC16-201ENST00000599858 1437 ntBASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 AC009336.1-201ENST00000608941 1553 ntBASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC144NLQ6NUI1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 AC046185.3-201ENST00000623228 1824 ntBASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 SPDYE21P-201ENST00000413323 827 ntBASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 TPM4P1-201ENST00000436100 807 ntBASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 MTDHP3-201ENST00000594186 672 ntBASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC144NLQ6NUI1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC144NLQ6NUI1 AC016396.2-201ENST00000562575 1417 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms