Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VARS2Q5ST30 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.36■□□□□ 0.53
VARS2Q5ST30 LYSMD4-203ENST00000378904 2122 ntBASIC18.36■□□□□ 0.53
VARS2Q5ST30 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.36■□□□□ 0.53
VARS2Q5ST30 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VARS2Q5ST30 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.36■□□□□ 0.53
VARS2Q5ST30 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
VARS2Q5ST30 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
VARS2Q5ST30 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.36■□□□□ 0.53
VARS2Q5ST30 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.36■□□□□ 0.53
VARS2Q5ST30 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VARS2Q5ST30 TMEM14EP-202ENST00000639378 1296 ntBASIC18.36■□□□□ 0.53
VARS2Q5ST30 AC134684.3-201ENST00000641758 218 ntBASIC18.36■□□□□ 0.53
VARS2Q5ST30 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VARS2Q5ST30 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.36■□□□□ 0.53
VARS2Q5ST30 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VARS2Q5ST30 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 AL355312.1-201ENST00000407115 2176 ntBASIC18.35■□□□□ 0.53
VARS2Q5ST30 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 AC004877.2-201ENST00000623941 599 ntBASIC18.35■□□□□ 0.53
VARS2Q5ST30 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
VARS2Q5ST30 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VARS2Q5ST30 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 RHOQP3-201ENST00000437982 621 ntBASIC18.34■□□□□ 0.53
VARS2Q5ST30 ALG1L5P-201ENST00000482043 771 ntBASIC18.34■□□□□ 0.53
VARS2Q5ST30 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 BCL2-203ENST00000589955 5011 ntBASIC18.34■□□□□ 0.53
VARS2Q5ST30 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms