Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP46P62068 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP46P62068 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
USP46P62068 AC008764.6-201ENST00000595909 2069 ntBASIC18.28■□□□□ 0.52
USP46P62068 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.28■□□□□ 0.52
USP46P62068 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.28■□□□□ 0.52
USP46P62068 AC136632.2-201ENST00000512891 861 ntBASIC18.28■□□□□ 0.52
USP46P62068 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.28■□□□□ 0.52
USP46P62068 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 AC023511.2-201ENST00000618803 211 ntBASIC18.28■□□□□ 0.52
USP46P62068 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.28■□□□□ 0.52
USP46P62068 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.28■□□□□ 0.52
USP46P62068 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 AL355312.1-201ENST00000407115 2176 ntBASIC18.28■□□□□ 0.52
USP46P62068 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP46P62068 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USP46P62068 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP46P62068 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP46P62068 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP46P62068 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP46P62068 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP46P62068 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.27■□□□□ 0.52
USP46P62068 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
USP46P62068 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP46P62068 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.27■□□□□ 0.52
USP46P62068 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP46P62068 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.27■□□□□ 0.52
USP46P62068 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.27■□□□□ 0.52
USP46P62068 AL139424.1-201ENST00000607572 797 ntBASIC18.27■□□□□ 0.52
USP46P62068 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP46P62068 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP46P62068 MIR1199-201ENST00000621445 119 ntBASIC18.27■□□□□ 0.52
USP46P62068 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP46P62068 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP46P62068 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
USP46P62068 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.27■□□□□ 0.51
USP46P62068 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP46P62068 PRORSD1P-202ENST00000563365 2154 ntBASIC18.27■□□□□ 0.51
USP46P62068 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
USP46P62068 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP46P62068 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
USP46P62068 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
USP46P62068 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
USP46P62068 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 LINC00982-205ENST00000420957 435 ntBASIC18.26■□□□□ 0.51
USP46P62068 SLC25A6P5-201ENST00000435663 894 ntBASIC18.26■□□□□ 0.51
USP46P62068 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.26■□□□□ 0.51
USP46P62068 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
USP46P62068 AC140113.2-201ENST00000604370 208 ntBASIC18.26■□□□□ 0.51
USP46P62068 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.26■□□□□ 0.51
USP46P62068 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
USP46P62068 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.26■□□□□ 0.51
USP46P62068 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP46P62068 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
USP46P62068 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
USP46P62068 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.25■□□□□ 0.51
USP46P62068 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.25■□□□□ 0.51
USP46P62068 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
USP46P62068 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.25■□□□□ 0.51
USP46P62068 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
USP46P62068 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms