Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.95□□□□□ -0.34
CMC4P56277 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.95□□□□□ -0.34
CMC4P56277 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.95□□□□□ -0.34
CMC4P56277 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.95□□□□□ -0.34
CMC4P56277 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.95□□□□□ -0.34
CMC4P56277 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.95□□□□□ -0.34
CMC4P56277 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 AKR1C7P-201ENST00000305623 895 ntBASIC12.95□□□□□ -0.34
CMC4P56277 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
CMC4P56277 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.95□□□□□ -0.34
CMC4P56277 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CMC4P56277 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.95□□□□□ -0.34
CMC4P56277 LAGE3P1-201ENST00000425356 484 ntBASIC12.95□□□□□ -0.34
CMC4P56277 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.95□□□□□ -0.34
CMC4P56277 MTDHP4-201ENST00000600287 670 ntBASIC12.95□□□□□ -0.34
CMC4P56277 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.95□□□□□ -0.34
CMC4P56277 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CMC4P56277 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CMC4P56277 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 AC012317.2-201ENST00000623305 2251 ntBASIC12.95□□□□□ -0.34
CMC4P56277 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CMC4P56277 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.95□□□□□ -0.34
CMC4P56277 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMC4P56277 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 AL355312.1-201ENST00000407115 2176 ntBASIC12.94□□□□□ -0.34
CMC4P56277 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
CMC4P56277 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.94□□□□□ -0.34
CMC4P56277 KRT18P67-201ENST00000432816 1264 ntBASIC12.94□□□□□ -0.34
CMC4P56277 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 RNPS1P1-201ENST00000507437 918 ntBASIC12.94□□□□□ -0.34
CMC4P56277 OR7E14P-202ENST00000530490 1290 ntBASIC12.94□□□□□ -0.34
CMC4P56277 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.94□□□□□ -0.34
CMC4P56277 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.94□□□□□ -0.34
CMC4P56277 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.94□□□□□ -0.34
CMC4P56277 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.94□□□□□ -0.34
CMC4P56277 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.94□□□□□ -0.34
CMC4P56277 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.94□□□□□ -0.34
CMC4P56277 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
CMC4P56277 MIR1199-201ENST00000621445 119 ntBASIC12.94□□□□□ -0.34
CMC4P56277 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.94□□□□□ -0.34
CMC4P56277 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CMC4P56277 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.94□□□□□ -0.34
CMC4P56277 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMC4P56277 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.94□□□□□ -0.34
CMC4P56277 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.93□□□□□ -0.34
CMC4P56277 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
CMC4P56277 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC12.93□□□□□ -0.34
CMC4P56277 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
CMC4P56277 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.93□□□□□ -0.34
CMC4P56277 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CMC4P56277 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.93□□□□□ -0.34
CMC4P56277 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.93□□□□□ -0.34
CMC4P56277 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms