Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HMGCS2P54868 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCS2P54868 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS2P54868 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS2P54868 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS2P54868 AC140658.5-201ENST00000438532 169 ntBASIC19.93■□□□□ 0.78
HMGCS2P54868 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGCS2P54868 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGCS2P54868 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGCS2P54868 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCS2P54868 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS2P54868 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS2P54868 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGCS2P54868 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGCS2P54868 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS2P54868 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HMGCS2P54868 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS2P54868 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS2P54868 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HMGCS2P54868 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS2P54868 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCS2P54868 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCS2P54868 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCS2P54868 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
HMGCS2P54868 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HMGCS2P54868 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCS2P54868 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCS2P54868 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HMGCS2P54868 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
HMGCS2P54868 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 LINC01451-201ENST00000623792 534 ntBASIC19.92■□□□□ 0.78
HMGCS2P54868 AC009093.7-201ENST00000623853 1223 ntBASIC19.92■□□□□ 0.78
HMGCS2P54868 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.92■□□□□ 0.78
HMGCS2P54868 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HMGCS2P54868 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.92■□□□□ 0.78
HMGCS2P54868 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HMGCS2P54868 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS2P54868 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HMGCS2P54868 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HMGCS2P54868 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCS2P54868 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HMGCS2P54868 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.91■□□□□ 0.78
HMGCS2P54868 FAM86GP-201ENST00000448322 971 ntBASIC19.91■□□□□ 0.78
HMGCS2P54868 SPDYE11-202ENST00000450699 704 ntBASIC19.91■□□□□ 0.78
HMGCS2P54868 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCS2P54868 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HMGCS2P54868 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCS2P54868 SPDYE9P-201ENST00000570642 692 ntBASIC19.91■□□□□ 0.78
HMGCS2P54868 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.91■□□□□ 0.78
HMGCS2P54868 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCS2P54868 SPDYE10P-202ENST00000612005 668 ntBASIC19.91■□□□□ 0.78
HMGCS2P54868 SPDYE8P-202ENST00000612377 668 ntBASIC19.91■□□□□ 0.78
HMGCS2P54868 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCS2P54868 AL645728.2-201ENST00000641974 660 ntBASIC19.91■□□□□ 0.78
HMGCS2P54868 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCS2P54868 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.91■□□□□ 0.78
HMGCS2P54868 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCS2P54868 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCS2P54868 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.91■□□□□ 0.78
HMGCS2P54868 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCS2P54868 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS2P54868 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS2P54868 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HMGCS2P54868 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS2P54868 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
HMGCS2P54868 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS2P54868 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS2P54868 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS2P54868 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.9■□□□□ 0.78
HMGCS2P54868 AC005237.2-201ENST00000434368 219 ntBASIC19.9■□□□□ 0.78
HMGCS2P54868 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCS2P54868 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCS2P54868 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
HMGCS2P54868 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS2P54868 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.9■□□□□ 0.78
HMGCS2P54868 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.9■□□□□ 0.78
HMGCS2P54868 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.9■□□□□ 0.78
HMGCS2P54868 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms