Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.61■□□□□ 0.73
USP11P51784 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.61■□□□□ 0.73
USP11P51784 AC136632.2-201ENST00000512891 861 ntBASIC19.61■□□□□ 0.73
USP11P51784 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.61■□□□□ 0.73
USP11P51784 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.61■□□□□ 0.73
USP11P51784 AL356488.2-201ENST00000602755 427 ntBASIC19.61■□□□□ 0.73
USP11P51784 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.61■□□□□ 0.73
USP11P51784 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.61■□□□□ 0.73
USP11P51784 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.61■□□□□ 0.73
USP11P51784 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.61■□□□□ 0.73
USP11P51784 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USP11P51784 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.61■□□□□ 0.73
USP11P51784 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
USP11P51784 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
USP11P51784 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 AP002414.3-201ENST00000589352 1468 ntBASIC19.6■□□□□ 0.73
USP11P51784 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.6■□□□□ 0.73
USP11P51784 AC243591.1-201ENST00000452967 1364 ntBASIC19.6■□□□□ 0.73
USP11P51784 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 AC093525.9-201ENST00000624961 1746 ntBASIC19.6■□□□□ 0.73
USP11P51784 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
USP11P51784 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.6■□□□□ 0.73
USP11P51784 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.6■□□□□ 0.73
USP11P51784 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.6■□□□□ 0.73
USP11P51784 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.6■□□□□ 0.73
USP11P51784 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.6■□□□□ 0.73
USP11P51784 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP11P51784 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.6■□□□□ 0.73
USP11P51784 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
USP11P51784 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
USP11P51784 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
USP11P51784 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
USP11P51784 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.59■□□□□ 0.73
USP11P51784 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.59■□□□□ 0.73
USP11P51784 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.59■□□□□ 0.73
USP11P51784 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.59■□□□□ 0.73
USP11P51784 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.59■□□□□ 0.73
USP11P51784 AC079776.4-201ENST00000511039 504 ntBASIC19.59■□□□□ 0.73
USP11P51784 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.59■□□□□ 0.73
USP11P51784 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.59■□□□□ 0.73
USP11P51784 BX640515.1-201ENST00000617215 977 ntBASIC19.59■□□□□ 0.73
USP11P51784 MIR1199-201ENST00000621445 119 ntBASIC19.59■□□□□ 0.73
USP11P51784 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.59■□□□□ 0.73
USP11P51784 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP11P51784 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
USP11P51784 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
USP11P51784 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.59■□□□□ 0.73
USP11P51784 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP11P51784 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP11P51784 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP11P51784 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP11P51784 AC141586.5-201ENST00000624546 2050 ntBASIC19.58■□□□□ 0.73
USP11P51784 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
USP11P51784 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.58■□□□□ 0.73
USP11P51784 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP11P51784 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP11P51784 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP11P51784 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP11P51784 ELK2BP-201ENST00000415014 1224 ntBASIC19.58■□□□□ 0.72
USP11P51784 AC092910.1-201ENST00000482027 1129 ntBASIC19.58■□□□□ 0.72
USP11P51784 IGHV3-22-201ENST00000520721 359 ntBASIC19.58■□□□□ 0.72
USP11P51784 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.58■□□□□ 0.72
USP11P51784 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.58■□□□□ 0.72
USP11P51784 AL805961.1-202ENST00000641562 540 ntBASIC19.58■□□□□ 0.72
USP11P51784 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
USP11P51784 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.58■□□□□ 0.72
USP11P51784 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
USP11P51784 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
USP11P51784 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms